Yan Y, Wei CL, Zhang WR, Cheng HP, Liu J: Cross-talk between calcium and reactive oxygen species signaling. Acta Pharmacol Sin. 2006, 27: 821-826. 10.1111/j.1745-7254.2006.00390.x.
Article
CAS
PubMed
Google Scholar
Wang D, Feng J, Wen R, Marine JC, Sangster MY, Parganas E, Hoffmeyer A, Jackson CW, Cleveland JL, Murray PJ, Ihle JN: Phospholipase Cgamma2 is essential in the functions of B cell and several Fc receptors. Immunity. 2000, 13: 25-35. 10.1016/S1074-7613(00)00005-4.
Article
PubMed
Google Scholar
Feske S: Calcium signalling in lymphocyte activation and disease. Nat Rev Immunol. 2007, 7: 690-702. 10.1038/nri2152.
Article
CAS
PubMed
Google Scholar
Varga-Szabo D, Braun A, Nieswandt B: Calcium signaling in platelets. J Thromb Haemost. 2009, 7: 1057-1066. 10.1111/j.1538-7836.2009.03455.x.
Article
CAS
PubMed
Google Scholar
Berridge MJ, Bootman MD, Lipp P: Calcium--a life and death signal. Nature. 1998, 395: 645-648. 10.1038/27094.
Article
CAS
PubMed
Google Scholar
Berridge MJ, Lipp P, Bootman MD: The versatility and universality of calcium signalling. Nat Rev Mol Cell Biol. 2000, 1: 11-21. 10.1038/35036035.
Article
CAS
PubMed
Google Scholar
Carafoli E, Santella L, Branca D, Brini M: Generation, control, and processing of cellular calcium signals. Crit Rev Biochem Mol Biol. 2001, 36: 107-260. 10.1080/20014091074183.
Article
CAS
PubMed
Google Scholar
Kretsinger RH, Nockolds CE: Carp muscle calcium-binding protein. II. Structure determination and general description. J Biol Chem. 1973, 248: 3313-3326.
CAS
PubMed
Google Scholar
Collins JH: Homology of myosin light chains, troponin-C and parvalbumins deduced from comparison of their amino acid sequences. Biochem Biophys Res Commun. 1974, 58: 301-308. 10.1016/0006-291X(74)90927-9.
Article
CAS
PubMed
Google Scholar
Collins JH, Potter JD, Horn MJ, Wilshire G, Jackman N: The amino acid sequence of rabbit skeletal muscle troponin C: gene replication and homology with calcium-binding proteins from carp and hake muscle. FEBS Lett. 1973, 36: 268-272. 10.1016/0014-5793(73)80388-6.
Article
CAS
PubMed
Google Scholar
Stevens FC, Walsh M, Ho HC, Teo TS, Wang JH: Comparison of calcium-binding proteins. Bovine heart and brain protein activators of cyclic nucleotide phosphodiesterase and rabbit skeletal muscle troponin C. J Biol Chem. 1976, 251: 4495-4500.
CAS
PubMed
Google Scholar
Wang SS, Tsai RY, Reed RR: The characterization of the Olf-1/EBF-like HLH transcription factor family: implications in olfactory gene regulation and neuronal development. J Neurosci. 1997, 17: 4149-4158.
CAS
PubMed
Google Scholar
Kawasaki H, Kretsinger RH: Calcium-binding proteins 1: EF-hands. Protein Profile. 1995, 2: 297-490.
CAS
PubMed
Google Scholar
Kroczek C, Lang C, Brachs S, Grohmann M, Dutting S, Schweizer A, Nitschke L, Feller SM, Jäck HM, Mielenz D: Swiprosin-1/EFhd2 controls B cell receptor signaling through the assembly of the B cell receptor, Syk, and phospholipase C gamma2 in membrane rafts. J Immunol. 2010, 184: 3665-3676. 10.4049/jimmunol.0903642.
Article
CAS
PubMed
Google Scholar
Vega IE, Traverso EE, Ferrer-Acosta Y, Matos E, Colon M, Gonzalez J, Dickson D, Hutton M, Lewis J, Yen SH: A novel calcium-binding protein is associated with tau proteins in tauopathy. J Neurochem. 2008, 106: 96-106. 10.1111/j.1471-4159.2008.05339.x. Epub 2008 Jul 2001
Article
PubMed Central
CAS
PubMed
Google Scholar
Tominaga M, Kurihara H, Honda S, Amakawa G, Sakai T, Tomooka Y: Molecular characterization of mitocalcin, a novel mitochondrial Ca2+-binding protein with EF-hand and coiled-coil domains. J Neurochem. 2006, 96: 292-304. 10.1111/j.1471-4159.2005.03554.x.
Article
CAS
PubMed
Google Scholar
Wakeland EK, Liu K, Graham RR, Behrens TW: Delineating the genetic basis of systemic lupus erythematosus. Immunity. 2001, 15: 397-408. 10.1016/S1074-7613(01)00201-1.
Article
CAS
PubMed
Google Scholar
van Duijn CM, Dekker MC, Bonifati V, Galjaard RJ, Houwing-Duistermaat JJ, Snijders PJ, Testers L, Breedveld GJ, Horstink M, Sandkuijl LA, van Swieten JC, Oostra BA, Heutink P: Park7, a novel locus for autosomal recessive early-onset parkinsonism, on chromosome 1p36. Am J Hum Genet. 2001, 69: 629-634. 10.1086/322996.
Article
PubMed Central
CAS
PubMed
Google Scholar
Quinones-Coello AT, Petrella LN, Ayers K, Melillo A, Mazzalupo S, Hudson AM, Wang S, Castiblanco C, Buszczak M, Hoskins RA, Cooley L: Exploring strategies for protein trapping in Drosophila. Genetics. 2007, 175: 1089-1104. 10.1534/genetics.106.065995.
Article
PubMed Central
CAS
PubMed
Google Scholar
Furlong EE, Andersen EC, Null B, White KP, Scott MP: Patterns of gene expression during Drosophila mesoderm development. Science. 2001, 293: 1629-1633. 10.1126/science.1062660. Epub 2001 Aug 1622
Article
CAS
PubMed
Google Scholar
Estrada B, Choe SE, Gisselbrecht SS, Michaud S, Raj L, Busser BW, Halfon MS, Church GM, Michelson AM: An integrated strategy for analyzing the unique developmental programs of different myoblast subtypes. PLoS Genet. 2006, 2: e16-10.1371/journal.pgen.0020016. Epub 2006 Feb 17
Article
PubMed Central
PubMed
CAS
Google Scholar
Kiefer JC: Is your "gene of interest" interesting?. Dev Dyn. 2007, 236: 2962-2969. 10.1002/dvdy.21304.
Article
PubMed
Google Scholar
Shin JH, Yang JW, Le Pecheur M, London J, Hoeger H, Lubec G: Altered expression of hypothetical proteins in hippocampus of transgenic mice overexpressing human Cu/Zn-superoxide dismutase 1. Proteome Sci. 2004, 2: 2-10.1186/1477-5956-2-2.
Article
PubMed Central
PubMed
CAS
Google Scholar
Martins-de-Souza D, Gattaz WF, Schmitt A, Rewerts C, Maccarrone G, Dias-Neto E, Turck CW: Prefrontal cortex shotgun proteome analysis reveals altered calcium homeostasis and immune system imbalance in schizophrenia. Eur Arch Psychiatry Clin Neurosci. 2009, 259: 151-163. 10.1007/s00406-008-0847-2.
Article
PubMed
Google Scholar
MacLaren EJ, Sikela JM: Cerebellar gene expression profiling and eQTL analysis in inbred mouse strains selected for ethanol sensitivity. Alcohol Clin Exp Res. 2005, 29: 1568-1579. 10.1097/01.alc.0000179376.27331.ac.
Article
CAS
PubMed
Google Scholar
Zhang AX, Yu WH, Ma BF, Yu XB, Mao FF, Liu W, Zhang JQ, Zhang XM, Li SN, Li MT, Lahn BT, Xiang AP: Proteomic identification of differently expressed proteins responsible for osteoblast differentiation from human mesenchymal stem cells. Mol Cell Biochem. 2007, 304: 167-179. 10.1007/s11010-007-9497-3.
Article
CAS
PubMed
Google Scholar
Nomiyama H, Egami K, Wada N, Tou K, Horiuchi M, Matsusaki H, Miura R, Yoshie O, Kukita T: Identification of genes differentially expressed in osteoclast-like cells. J Interferon Cytokine Res. 2005, 25: 227-231. 10.1089/jir.2005.25.227.
Article
CAS
PubMed
Google Scholar
Ramesh TP, Kim YD, Kwon MS, Jun CD, Kim SW: Swiprosin-1 Regulates Cytokine Expression of Human Mast Cell Line HMC-1 through Actin Remodeling. Immune Netw. 2009, 9: 274-284. 10.4110/in.2009.9.6.274.
Article
PubMed Central
CAS
PubMed
Google Scholar
Thylur RP, Kim YD, Kwon MS, Oh HM, Kwon HK, Kim SH, Im SH, Chun JS, Park ZY, Jun CD: Swiprosin-1 is expressed in mast cells and up-regulated through the protein kinase C beta I/eta pathway. J Cell Biochem. 2009, 108: 705-715. 10.1002/jcb.22307.
Article
CAS
PubMed
Google Scholar
Mielenz D, Vettermann C, Hampel M, Lang C, Avramidou A, Karas M, Jäck HM: Lipid rafts associate with intracellular B cell receptors and exhibit a B cell stage-specific protein composition. J Immunol. 2005, 174: 3508-3517.
Article
CAS
PubMed
Google Scholar
Avramidou A, Kroczek C, Lang C, Schuh W, Jäck HM, Mielenz D: The novel adaptor protein Swiprosin-1 enhances BCR signals and contributes to BCR-induced apoptosis. Cell Death Differ. 2007, 14: 1936-1947. 10.1038/sj.cdd.4402206. Epub 2007 Aug 3
Article
CAS
PubMed
Google Scholar
Haining WN, Ebert BL, Subrmanian A, Wherry EJ, Eichbaum Q, Evans JW, Mak R, Rivoli S, Pretz J, Angelosanto J, Smutko JS, Walker BD, Kaech SM, Ahmed R, Nadler LM, Golub TR: Identification of an evolutionarily conserved transcriptional signature of CD8 memory differentiation that is shared by T and B cells. J Immunol. 2008, 181: 1859-1868.
Article
PubMed Central
CAS
PubMed
Google Scholar
Vuadens F, Rufer N, Kress A, Corthesy P, Schneider P, Tissot JD: Identification of swiprosin 1 in human lymphocytes. Proteomics. 2004, 4: 2216-2220. 10.1002/pmic.200300779.
Article
CAS
PubMed
Google Scholar
Marson A, Kretschmer K, Frampton GM, Jacobsen ES, Polansky JK, MacIsaac KD, Levine SS, Fraenkel E, von Boehmer H, Young RA: Foxp3 occupancy and regulation of key target genes during T-cell stimulation. Nature. 2007, 445: 931-935. 10.1038/nature05478.
Article
PubMed Central
CAS
PubMed
Google Scholar
Meng X, Wilkins JA: Compositional characterization of the cytoskeleton of NK-like cells. J Proteome Res. 2005, 4: 2081-2087. 10.1021/pr0502121.
Article
CAS
PubMed
Google Scholar
Dotzlaw H, Schulz M, Eggert M, Neeck G: A pattern of protein expression in peripheral blood mononuclear cells distinguishes rheumatoid arthritis patients from healthy individuals. Biochim Biophys Acta. 2004, 1696: 121-129.
Article
CAS
PubMed
Google Scholar
Schulz M, Dotzlaw H, Mikkat S, Eggert M, Neeck G: Proteomic analysis of peripheral blood mononuclear cells: selective protein processing observed in patients with rheumatoid arthritis. J Proteome Res. 2007, 6: 3752-3759. 10.1021/pr070285f. Epub 2007 Aug 17
Article
CAS
PubMed
Google Scholar
Ballif BA, Carey GR, Sunyaev SR, Gygi SP: Large-scale identification and evolution indexing of tyrosine phosphorylation sites from murine brain. J Proteome Res. 2008, 7: 311-318. 10.1021/pr0701254. Epub 2007 Nov 23
Article
CAS
PubMed
Google Scholar
Reynolds AD, Glanzer JG, Kadiu I, Ricardo-Dukelow M, Chaudhuri A, Ciborowski P, Cerny R, Gelman B, Thomas MP, Mosley RL, Gendelman HE: Nitrated alpha-synuclein-activated microglial profiling for Parkinson's disease. J Neurochem. 2008, 104: 1504-1525. 10.1111/j.1471-4159.2007.05087.x.
Article
CAS
PubMed
Google Scholar
Merkley MA, Hildebrandt E, Podolsky RH, Arnouk H, Ferris DG, Dynan WS, Stoppler H: Large-scale analysis of protein expression changes in human keratinocytes immortalized by human papilloma virus type 16 E6 and E7 oncogenes. Proteome Sci. 2009, 7: 29-10.1186/1477-5956-7-29.
Article
PubMed Central
PubMed
CAS
Google Scholar
Tamplin OJ, Kinzel D, Cox BJ, Bell CE, Rossant J, Lickert H: Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives. BMC Genomics. 2008, 9: 511-10.1186/1471-2164-9-511.
Article
PubMed Central
PubMed
CAS
Google Scholar
Blagoev B, Ong SE, Kratchmarova I, Mann M: Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics. Nat Biotechnol. 2004, 22: 1139-1145. 10.1038/nbt1005.
Article
CAS
PubMed
Google Scholar
Mocsai A, Ruland J, Tybulewicz VL: The SYK tyrosine kinase: a crucial player in diverse biological functions. Nat Rev Immunol. 2010, 10: 387-402. 10.1038/nri2765.
Article
CAS
PubMed
Google Scholar
Flaswinkel H, Barner M, Reth M: The tyrosine activation motif as a target of protein tyrosine kinases and SH2 domains. Semin Immunol. 1995, 7: 21-27. 10.1016/1044-5323(95)90004-7.
Article
CAS
PubMed
Google Scholar
Rolli V, Gallwitz M, Wossning T, Flemming A, Schamel WW, Zurn C, Reth M: Amplification of B cell antigen receptor signaling by a Syk/ITAM positive feedback loop. Mol Cell. 2002, 10: 1057-1069. 10.1016/S1097-2765(02)00739-6.
Article
CAS
PubMed
Google Scholar
Hara H, Saito T: CARD9 versus CARMA1 in innate and adaptive immunity. Trends Immunol. 2009, 30: 234-242. 10.1016/j.it.2009.03.002.
Article
CAS
PubMed
Google Scholar
Williams MJ: Drosophila hemopoiesis and cellular immunity. J Immunol. 2007, 178: 4711-4716.
Article
CAS
PubMed
Google Scholar
Henikoff S, Henikoff JG, Sakai A, Loeb GB, Ahmad K: Genome-wide profiling of salt fractions maps physical properties of chromatin. Genome Res. 2009, 19: 460-469. 10.1101/gr.087619.108. Epub 2008 Dec 2016
Article
PubMed Central
CAS
PubMed
Google Scholar
Xu Y, Liu W, Shen H, Yan J, Yang E, Wang H: Recombinant Mycobacterium bovis BCG expressing chimaeric protein of Ag85B and ESAT-6 enhances immunostimulatory activity of human macrophages. Microbes Infect. 2010, 12: 683-689. 10.1016/j.micinf.2010.04.002.
Article
CAS
PubMed
Google Scholar
Heasman SJ, Ridley AJ: Mammalian Rho GTPases: new insights into their functions from in vivo studies. Nat Rev Mol Cell Biol. 2008, 9: 690-701. 10.1038/nrm2476.
Article
CAS
PubMed
Google Scholar
Park H, Cox D: Cdc42 regulates Fc gamma receptor-mediated phagocytosis through the activation and phosphorylation of Wiskott-Aldrich syndrome protein (WASP) and neural-WASP. Mol Biol Cell. 2009, 20: 4500-4508. 10.1091/mbc.E09-03-0230.
Article
PubMed Central
CAS
PubMed
Google Scholar
Patel JC, Hall A, Caron E: Vav regulates activation of Rac but not Cdc42 during FcgammaR-mediated phagocytosis. Mol Biol Cell. 2002, 13: 1215-1226. 10.1091/mbc.02-01-0002.
Article
PubMed Central
CAS
PubMed
Google Scholar
Castellano F, Montcourrier P, Chavrier P: Membrane recruitment of Rac1 triggers phagocytosis. J Cell Sci. 2000, 113 (Pt 17): 2955-2961.
CAS
PubMed
Google Scholar
Leverrier Y, Ridley AJ: Requirement for Rho GTPases and PI 3-kinases during apoptotic cell phagocytosis by macrophages. Curr Biol. 2001, 11: 195-199. 10.1016/S0960-9822(01)00047-1.
Article
CAS
PubMed
Google Scholar
Checinska A, Giaccone G, Rodriguez JA, Kruyt FA, Jimenez CR: Comparative proteomics analysis of caspase-9-protein complexes in untreated and cytochrome c/dATP stimulated lysates of NSCLC cells. J Proteomics. 2009, 72: 575-585. 10.1016/j.jprot.2008.11.016. Epub 2008 Dec 7
Article
CAS
PubMed
Google Scholar
Lewis J, McGowan E, Rockwood J, Melrose H, Nacharaju P, Van Slegtenhorst M, Gwinn-Hardy K, Paul Murphy M, Baker M, Yu X, Duff K, Hardy J, Corral A, Lin WL, Yen SH, Dickson DW, Davies P, Hutton M: Neurofibrillary tangles, amyotrophy and progressive motor disturbance in mice expressing mutant (P301L) tau protein. Nat Genet. 2000, 25: 402-405. 10.1038/78078.
Article
CAS
PubMed
Google Scholar
Liu G, Ma H, Jiang L, Zhao Y: Allograft inflammatory factor-1 and its immune regulation. Autoimmunity. 2007, 40: 95-102. 10.1080/08916930601083946.
Article
CAS
PubMed
Google Scholar
Mishima T, Iwabuchi K, Fujii S, Tanaka SY, Ogura H, Watano-Miyata K, Ishimori N, Andoh Y, Nakai Y, Iwabuchi C, Ato M, Kitabatake A, Tsutsui H, Onoe K: Allograft inflammatory factor-1 augments macrophage phagocytotic activity and accelerates the progression of atherosclerosis in ApoE-/- mice. Int J Mol Med. 2008, 21: 181-187.
CAS
PubMed
Google Scholar
Autieri MV, Chen X: The ability of AIF-1 to activate human vascular smooth muscle cells is lost by mutations in the EF-hand calcium-binding region. Exp Cell Res. 2005, 307: 204-211. 10.1016/j.yexcr.2005.03.002.
Article
CAS
PubMed
Google Scholar
Watano K, Iwabuchi K, Fujii S, Ishimori N, Mitsuhashi S, Ato M, Kitabatake A, Onoe K: Allograft inflammatory factor-1 augments production of interleukin-6, -10 and -12 by a mouse macrophage line. Immunology. 2001, 104: 307-316. 10.1046/j.1365-2567.2001.01301.x.
Article
PubMed Central
CAS
PubMed
Google Scholar
Rawlings DJ, Sommer K, Moreno-Garcia ME: The CARMA1 signalosome links the signalling machinery of adaptive and innate immunity in lymphocytes. Nat Rev Immunol. 2006, 6: 799-812. 10.1038/nri1944.
Article
CAS
PubMed
Google Scholar
Sen R: Control of B lymphocyte apoptosis by the transcription factor NF-kappaB. Immunity. 2006, 25: 871-883. 10.1016/j.immuni.2006.12.003.
Article
CAS
PubMed
Google Scholar
Strasser A, Puthalakath H, O'Reilly LA, Bouillet P: What do we know about the mechanisms of elimination of autoreactive T and B cells and what challenges remain. Immunol Cell Biol. 2008, 86: 57-66. 10.1038/sj.icb.7100141.
Article
CAS
PubMed
Google Scholar
Schulze C, Munoz LE, Franz S, Sarter K, Chaurio RA, Gaipl US, Herrmann M: Clearance deficiency--a potential link between infections and autoimmunity. Autoimmun Rev. 2008, 8: 5-8. 10.1016/j.autrev.2008.07.049.
Article
CAS
PubMed
Google Scholar
Dorner T: Crossroads of B cell activation in autoimmunity: rationale of targeting B cells. J Rheumatol Suppl. 2006, 77: 3-11.
PubMed
Google Scholar
Ballatore C, Lee VM, Trojanowski JQ: Tau-mediated neurodegeneration in Alzheimer's disease and related disorders. Nat Rev Neurosci. 2007, 8: 663-672. 10.1038/nrn2194.
Article
CAS
PubMed
Google Scholar
Lee VM, Goedert M, Trojanowski JQ: Neurodegenerative tauopathies. Annu Rev Neurosci. 2001, 24: 1121-1159. 10.1146/annurev.neuro.24.1.1121.
Article
CAS
PubMed
Google Scholar
Giasson BI, Forman MS, Higuchi M, Golbe LI, Graves CL, Kotzbauer PT, Trojanowski JQ, Lee VM: Initiation and synergistic fibrillization of tau and alpha-synuclein. Science. 2003, 300: 636-640. 10.1126/science.1082324.
Article
CAS
PubMed
Google Scholar
Amor S, Puentes F, Baker D, van der Valk P: Inflammation in neurodegenerative diseases. Immunology. 2010, 129: 154-169. 10.1111/j.1365-2567.2009.03225.x.
Article
PubMed Central
CAS
PubMed
Google Scholar
Graeber MB, Lopez-Redondo F, Ikoma E, Ishikawa M, Imai Y, Nakajima K, Kreutzberg GW, Kohsaka S: The microglia/macrophage response in the neonatal rat facial nucleus following axotomy. Brain Res. 1998, 813: 241-253. 10.1016/S0006-8993(98)00859-2.
Article
CAS
PubMed
Google Scholar
Zhai J, Strom AL, Kilty R, Venkatakrishnan P, White J, Everson WV, Smart EJ, Zhu H: Proteomic characterization of lipid raft proteins in amyotrophic lateral sclerosis mouse spinal cord. Febs J. 2009, 276: 3308-3323. 10.1111/j.1742-4658.2009.07057.x.
Article
PubMed Central
CAS
PubMed
Google Scholar
Perry JJ, Shin DS, Tainer JA: Amyotrophic lateral sclerosis. Adv Exp Med Biol. 2010, 685: 9-20. full_text.
Article
CAS
PubMed
Google Scholar
Dimou L, Schnell L, Montani L, Duncan C, Simonen M, Schneider R, Liebscher T, Gullo M, Schwab ME: Nogo-A-deficient mice reveal strain-dependent differences in axonal regeneration. J Neurosci. 2006, 26: 5591-5603. 10.1523/JNEUROSCI.1103-06.2006.
Article
CAS
PubMed
Google Scholar
Harder T, Engelhardt KR: Membrane domains in lymphocytes - from lipid rafts to protein scaffolds. Traffic. 2004, 5: 265-275. 10.1111/j.1600-0854.2003.00163.x.
Article
CAS
PubMed
Google Scholar
Harder T, Simons K: Clusters of glycolipid and glycosylphosphatidylinositol-anchored proteins in lymphoid cells: accumulation of actin regulated by local tyrosine phosphorylation. Eur J Immunol. 1999, 29: 556-562. 10.1002/(SICI)1521-4141(199902)29:02<556::AID-IMMU556>3.0.CO;2-2.
Article
CAS
PubMed
Google Scholar
Benarroch EE: Lipid rafts, protein scaffolds, and neurologic disease. Neurology. 2007, 69: 1635-1639. 10.1212/01.wnl.0000279590.22544.c3.
Article
PubMed
Google Scholar
Wechsler RJ, Monroe JG: Immature B lymphocytes are deficient in expression of the src-family kinases p59fyn and p55fgr1. J Immunol. 1995, 154: 1919-1929.
CAS
PubMed
Google Scholar
Numazaki M, Kato C, Kawauchi Y, Kajiwara T, Ishii M, Kojima N: Cross-linking of SIGNR1 activates JNK and induces TNF-alpha production in RAW264.7 cells that express SIGNR1. Biochem Biophys Res Commun. 2009, 386: 202-206. 10.1016/j.bbrc.2009.06.011.
Article
CAS
PubMed
Google Scholar
Link DC, Zutter M: The proto-oncogene c-fgr is expressed in normal mantle zone B lymphocytes and is developmentally regulated during myelomonocytic differentiation in vivo. Blood. 1995, 85: 472-479.
CAS
PubMed
Google Scholar
Blethrow JD, Glavy JS, Morgan DO, Shokat KM: Covalent capture of kinase-specific phosphopeptides reveals Cdk1-cyclin B substrates. Proc Natl Acad Sci USA. 2008, 105: 1442-1447. 10.1073/pnas.0708966105. Epub 2008 Jan 1430
Article
PubMed Central
CAS
PubMed
Google Scholar
Dephoure N, Zhou C, Villen J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP: A quantitative atlas of mitotic phosphorylation. Proc Natl Acad Sci USA. 2008, 105: 10762-10767. 10.1073/pnas.0805139105. Epub 12008 Jul 31
Article
PubMed Central
CAS
PubMed
Google Scholar
Zanivan S, Gnad F, Wickstrom SA, Geiger T, Macek B, Cox J, Fassler R, Mann M: Solid Tumor Proteome and Phosphoproteome Analysis by High Resolution Mass Spectrometry. J Proteome Res. 2008, 31: 31-
Google Scholar
Weintz G, Olsen JV, Fruhauf K, Niedzielska M, Amit I, Jantsch J, Mages J, Frech C, Dolken L, Mann M, Lang R: The phosphoproteome of toll-like receptor-activated macrophages. Mol Syst Biol. 2010, 6: 371-10.1038/msb.2010.29.
Article
PubMed Central
PubMed
CAS
Google Scholar
Castedo M, Perfettini JL, Roumier T, Kroemer G: Cyclin-dependent kinase-1: linking apoptosis to cell cycle and mitotic catastrophe. Cell Death Differ. 2002, 9: 1287-1293. 10.1038/sj.cdd.4401130.
Article
CAS
PubMed
Google Scholar
Banerjee SK, Weston AP, Zoubine MN, Campbell DR, Cherian R: Expression of cdc2 and cyclin B1 in Helicobacter pylori-associated gastric MALT and MALT lymphoma: relationship to cell death, proliferation, and transformation. Am J Pathol. 2000, 156: 217-225.
Article
PubMed Central
CAS
PubMed
Google Scholar
Yamashita Y, Miyake K, Miura Y, Kaneko Y, Yagita H, Suda T, Nagata S, Nomura J, Sakaguchi N, Kimoto M: Activation mediated by RP105 but not CD40 makes normal B cells susceptible to anti-IgM-induced apoptosis: a role for Fc receptor coligation. J Exp Med. 1996, 184: 113-120. 10.1084/jem.184.1.113.
Article
CAS
PubMed
Google Scholar
Gupta N, Wollscheid B, Watts JD, Scheer B, Aebersold R, DeFranco AL: Quantitative proteomic analysis of B cell lipid rafts reveals that ezrin regulates antigen receptor-mediated lipid raft dynamics. Nat Immunol. 2006, 7: 625-633. 10.1038/ni1337. Epub 2006 Apr 30
Article
CAS
PubMed
Google Scholar
Tominaga M, Tomooka Y: Novel genes cloned from a neuronal cell line newly established from a cerebellum of an adult p53(-/-) mouse. Biochem Biophys Res Commun. 2002, 297: 473-479. 10.1016/S0006-291X(02)02225-8.
Article
CAS
PubMed
Google Scholar
Kuninger D, Wright A, Rotwein P: Muscle cell survival mediated by the transcriptional coactivators p300 and PCAF displays different requirements for acetyltransferase activity. Am J Physiol Cell Physiol. 2006, 291: C699-709. 10.1152/ajpcell.00056.2006.
Article
CAS
PubMed
Google Scholar
Lucas B, Grigo K, Erdmann S, Lausen J, Klein-Hitpass L, Ryffel GU: HNF4alpha reduces proliferation of kidney cells and affects genes deregulated in renal cell carcinoma. Oncogene. 2005, 24: 6418-6431.
CAS
PubMed
Google Scholar
Mandruzzato S, Callegaro A, Turcatel G, Francescato S, Montesco MC, Chiarion-Sileni V, Mocellin S, Rossi CR, Bicciato S, Wang E, Marincola FM, Zanovello P: A gene expression signature associated with survival in metastatic melanoma. J Transl Med. 2006, 4: 50-10.1186/1479-5876-4-50.
Article
PubMed Central
PubMed
Google Scholar
Vanharanta S, Wortham NC, Laiho P, Sjoberg J, Aittomaki K, Arola J, Tomlinson IP, Karhu A, Arango D, Aaltonen LA: 7q deletion mapping and expression profiling in uterine fibroids. Oncogene. 2005, 24: 6545-6554.
CAS
PubMed
Google Scholar
Winn VD, Haimov-Kochman R, Paquet AC, Yang YJ, Madhusudhan MS, Gormley M, Feng KT, Bernlohr DA, McDonagh S, Pereira L, Sali A, Fisher SJ: Gene expression profiling of the human maternal-fetal interface reveals dramatic changes between midgestation and term. Endocrinology. 2007, 148: 1059-1079. 10.1210/en.2006-0683.
Article
CAS
PubMed
Google Scholar
Popovici RM, Betzler NK, Krause MS, Luo M, Jauckus J, Germeyer A, Bloethner S, Schlotterer A, Kumar R, Strowitzki T, von Wolff M: Gene expression profiling of human endometrial-trophoblast interaction in a coculture model. Endocrinology. 2006, 147: 5662-5675. 10.1210/en.2006-0916.
Article
CAS
PubMed
Google Scholar
Hurt EM, Thomas SB, Peng B, Farrar WL: Molecular consequences of SOD2 expression in epigenetically silenced pancreatic carcinoma cell lines. Br J Cancer. 2007, 97: 1116-1123. 10.1038/sj.bjc.6604000.
Article
PubMed Central
CAS
PubMed
Google Scholar
Kim GW, Chan PH: Involvement of superoxide in excitotoxicity and DNA fragmentation in striatal vulnerability in mice after treatment with the mitochondrial toxin, 3-nitropropionic acid. J Cereb Blood Flow Metab. 2002, 22: 798-809. 10.1097/00004647-200207000-00005.
Article
CAS
PubMed
Google Scholar
Noshita N, Sugawara T, Fujimura M, Morita-Fujimura Y, Chan PH: Manganese Superoxide Dismutase Affects Cytochrome c Release and Caspase-9 Activation After Transient Focal Cerebral Ischemia in Mice. J Cereb Blood Flow Metab. 2001, 21: 557-567. 10.1097/00004647-200105000-00010.
Article
CAS
PubMed
Google Scholar
Stewart CE, Rotwein P: Insulin-like growth factor-II is an autocrine survival factor for differentiating myoblasts. J Biol Chem. 1996, 271: 11330-11338. 10.1074/jbc.271.19.11330.
Article
CAS
PubMed
Google Scholar
Gaub P, Tedeschi A, Puttagunta R, Nguyen T, Schmandke A, Di Giovanni S: HDAC inhibition promotes neuronal outgrowth and counteracts growth cone collapse through CBP/p300 and P/CAF-dependent p53 acetylation. Cell Death Differ. 2010, 17: 1392-1408. 10.1038/cdd.2009.216.
Article
CAS
PubMed
Google Scholar
Rouaux C, Jokic N, Mbebi C, Boutillier S, Loeffler JP, Boutillier AL: Critical loss of CBP/p300 histone acetylase activity by caspase-6 during neurodegeneration. Embo J. 2003, 22: 6537-6549. 10.1093/emboj/cdg615.
Article
PubMed Central
CAS
PubMed
Google Scholar
Lenburg ME, Liou LS, Gerry NP, Frampton GM, Cohen HT, Christman MF: Previously unidentified changes in renal cell carcinoma gene expression identified by parametric analysis of microarray data. BMC Cancer. 2003, 3: 31-10.1186/1471-2407-3-31.
Article
PubMed Central
PubMed
Google Scholar
Grigo K, Wirsing A, Lucas B, Klein-Hitpass L, Ryffel GU: HNF4 alpha orchestrates a set of 14 genes to down-regulate cell proliferation in kidney cells. Biol Chem. 2008, 389: 179-187. 10.1515/BC.2008.011.
Article
CAS
PubMed
Google Scholar
Bolotin E, Liao H, Ta TC, Yang C, Hwang-Verslues W, Evans JR, Jiang T, Sladek FM: Integrated approach for the identification of human hepatocyte nuclear factor 4alpha target genes using protein binding microarrays. Hepatology. 2010, 51: 642-653.
Article
PubMed Central
CAS
PubMed
Google Scholar
Guo H, Cai CQ, Kuo PC: Hepatocyte nuclear factor-4alpha mediates redox sensitivity of inducible nitric-oxide synthase gene transcription. J Biol Chem. 2002, 277: 5054-5060. 10.1074/jbc.M109017200.
Article
CAS
PubMed
Google Scholar
Guo H, Wei J, Inoue Y, Gonzalez FJ, Kuo PC: Serine/threonine phosphorylation regulates HNF-4alpha-dependent redox-mediated iNOS expression in hepatocytes. Am J Physiol Cell Physiol. 2003, 284: C1090-1099.
Article
CAS
PubMed
Google Scholar
Treiber T, Mandel EM, Pott S, Gyory I, Firner S, Liu ET, Grosschedl R: Early B cell factor 1 regulates B cell gene networks by activation, repression, and transcription- independent poising of chromatin. Immunity. 2010, 32: 714-725. 10.1016/j.immuni.2010.04.013.
Article
CAS
PubMed
Google Scholar
Zandi S, Mansson R, Tsapogas P, Zetterblad J, Bryder D, Sigvardsson M: EBF1 is essential for B-lineage priming and establishment of a transcription factor network in common lymphoid progenitors. J Immunol. 2008, 181: 3364-3372.
Article
CAS
PubMed
Google Scholar
Tothova Z, Kollipara R, Huntly BJ, Lee BH, Castrillon DH, Cullen DE, McDowell EP, Lazo-Kallanian S, Williams IR, Sears C, Armstrong SA, Passegue E, DePinho RA, Gilliland DG: FoxOs are critical mediators of hematopoietic stem cell resistance to physiologic oxidative stress. Cell. 2007, 128: 325-339. 10.1016/j.cell.2007.01.003.
Article
CAS
PubMed
Google Scholar
Squazzo SL, O'Geen H, Komashko VM, Krig SR, Jin VX, Jang SW, Margueron R, Reinberg D, Green R, Farnham PJ: Suz12 binds to silenced regions of the genome in a cell-type-specific manner. Genome Res. 2006, 16: 890-900. 10.1101/gr.5306606.
Article
PubMed Central
CAS
PubMed
Google Scholar
Kirmizis A, Bartley SM, Kuzmichev A, Margueron R, Reinberg D, Green R, Farnham PJ: Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27. Genes Dev. 2004, 18: 1592-1605. 10.1101/gad.1200204.
Article
PubMed Central
CAS
PubMed
Google Scholar
Kuzmichev A, Margueron R, Vaquero A, Preissner TS, Scher M, Kirmizis A, Ouyang X, Brockdorff N, Abate-Shen C, Farnham P, Reinberg D: Composition and histone substrates of polycomb repressive group complexes change during cellular differentiation. Proc Natl Acad Sci USA. 2005, 102: 1859-1864. 10.1073/pnas.0409875102.
Article
PubMed Central
CAS
PubMed
Google Scholar