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Table 3 Thermodynamic parameters of Mg2+, Ca2+, and Zn2+ ion complexation with nesfatin-3s derived from ITC data

From: Nesfatin-3 possesses divalent metal ion binding properties, which remain hidden in the nucleobindin-2 precursor protein

 

ggNesfatin-3

hsNesfatin-3

Mg2+

Ca2+

Zn2+

Ca2+

Zn2+

Model

Single site

Sequential two site

Single site and two independent sites

Single site

Single site, linear blank

[nesfatin-3] (µM)

120

95

120

85

80

[M2+] (µM)

2000

2000

2000

2000

2000

n1

2.30 ± 0.02

1.01 ± 0.01

2.08 ± 0.04

0.99 ± 0.02

Kd1 (µM)

2.4 ± 0.4

116 ± 81

7 × 10–3 ± 24 × 10–3

9 ± 1

7 ± 1

ΔH1 (kcal/mol)

3.47 ± 0.05

-6 ± 2

-4.57

-8.3 ± 0.2

-9.8 ± 0.4

S1 (cal/mol)

11,241

-187

6541

-1374

-2736

Intercept (µcal)

26 ± 2

Slope

-0.14 ± 0.05

n2

1.35 ± 0.06

Kd2 (µM)

45.9 ± 16.1

0.42 ± 0.29

ΔH2 (kcal/mol)

-6.36 ± 2.06

0.28 ± 0.87

S2 (cal/mol)

-437

8968.35

n3

1.12 ± 0.19

Kd3

31.11 ± 9.17

ΔH3 (kcal/mol)

-7.414 ± 1.83

S3 (cal/mol)

-1266

  1. M2+ – metal ion (Mg2+, Ca2+ or Zn2+), Kd1/d2/d3 – dissociation constant for the first, second or third binding site, ΔH1/2/3 – enthalpy of complex formation for the first, second or third binding site, TΔS1/2/3 – entropic factor for the first, second or third binding site