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Table 1 Primer sequences used in this study

From: Upregulation of fibronectin following loss of p53 function is a poor prognostic factor in ovarian carcinoma with a unique immunophenotype

Assay

Gene

 

Sequence

 

shRNA

p53 (position 775 to 794)

Forward

5′-GATCCGGACTCCAGTGGTAATCTACTTTCAAGAGAAGTAGATTACCACTGGAGTCTTTTTTG-3’

  

Reverse

5′-AATTCAAAAAAGACTCCAGTGGTAATCTACTTCTCTTGAAAGTAGATTACCACTGGAGTCCG-3’

Mutagenesis

p53 mutant type (R248Q)

Forward

5′-ATGAACCaGAGGCCCATCCTCACCATCATCA-3’

  

Reverse

5′-GGGCCTCtGGTTCATGCCGCCCATGCA-3’

mRNA

Fibronectin 1

Forward

5′- CCATCGCAAACCGCTGCCAT-3’

  

Reverse

5′-AACACTTCTCAGCTATGGGCTT-3’

Promoter

Fibronectin 1 (−2028 to − 23)

Forward

5′-CGGCTAGCTTCAGTGCAGTAAATATATC-3’

  

Reverse

5′- ATCTCGAGTTATATGGGACGGTCCCCTCCCGCC-3’