Assay | Primer identity | Primer sequence (5′-3′) | PCR-size (bp) |
---|---|---|---|
Pyro-sequencing | IGF2-DMR0-PS-F | TTTTTTGTTGTATTTTGGATTTAGATTTTTT | 186 |
IGF2-DMR0-PS-R | CTCCAAACACCCCCACCTTAA | ||
IGF2-DMR0-Seq | GTGGGGAGGGGGTTTATTTTT | ||
IGF2-H19-ICR-PS-F | GGGGGCTCTTGCATAGCACATGGGTA | 242 | |
IGF2-H19-ICR-PS-R | ATAAACCCTTATCCTATAAATACCCTCA | ||
IGF2-H19-ICR-PS-Seq | GGTATTTTTGGAGGTTTTTTT | ||
qMSP | GSTP1-MSP-U-F | GATGTTTGGGGTGTAGTGGTTGTT | 91 |
GSTP1-MSP-U-R | CCACCCCAATACTAAATCACAACA | ||
GSTP1-MSP-M-F | TTCGGGGTGTAGCGGTCGTC | 97 | |
GSTP1-MSP-M-R | GCCCCAATACTAAATCACGACG | ||
RT-qPCR | IGF2-RTPCR-F | GGGCAAGTTCTTCCAATATGA | 214 |
IGF2-RTPCR-R | TCACTTCCGATTGCTGGC | ||
ßActin-RTPCR-F | CGGAGTACTTGCGCTCAGGAGGA | 226 | |
ßActin-RTPCR-R | CCTTCCTTCCTGGGAATGGAGTC | ||
KLF4-RTPCR-F | ACTCGCCTTGCTGATTGTCT | 127 | |
KLF4-RTPCR-R | AATTGGCCGAGATCCTTCTT | ||
AMACR-RTPCR-F | ACGACTTACAGGACAGCAGA | 181 | |
AMACR-RTPCR-R | CCTTCGTCTTCTCTGCAAAT | ||
ChIP-qPCR | IGF2-DMR0-ChIP-F | CACCCTGGGGCCAAGGCAGT | 100 |
IGF2-DMR0-ChIP-R | CTTGAGGGGTCATGGCACGGAAT | ||
LOI study | IGF2-LOI-ApaI-F | CACCCCCCTCTTTCTCTTCT | 245 |
IGF2-LOI-ApaI-R | TACTGGGTCCCTCTGACTGCT | ||
CNV study | ZNF80-GCN-F | CTGTGACCTGCAGCTCATCCT | 120 |
ZNF80-GCN-R | TAAGTTCTCTGACGTTGACTGATGTG | ||
GPR15-GCN-F | GGTCCCTGGTGGCCTTAATT | 101 | |
GPR15-GCN-R | TTGCTGGTAATGGGCACACA |