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Table 1 Potential binding partners of Sec7 and its domains

From: The cytohesin paralog Sec7 of Dictyostelium discoideum is required for phagocytosis and cell motility

Dictybase ID

Description

Identified in Sec7 domain pull down

Identified in PH domain pull down (C-terminus)

Identified in GFP-Sec7 immuno-precipitation

Identified in N-domain pull down

Membrane trafficking, membrane associated processes

DDB0237869

cog3, oligomeric Golgi complex component

  

+

 

DDB0237794

osbH, oxysterol binding

   

+

DDB0185207

vatB, v-ATPase

 

+

  

DDB0234266

vatH, v-ATPase

 

+

  

DDB0233782

Present in macropinocytic proteome; conserved; transporter?

 

+

  

DDB0185052

nsfA, N-ethylmaleimide-sensitive fusion protein

 

+

  

DDB0234240

p3d1, delta adaptin (endosomal membrane)

 

+

  

DDB0234067

Ap1b1, adaptor-related protein complex 1, beta 1 subunit, beta adaptin, highly similar to AP-1 complex subunit beta-1 (AP1B1) and AP-2 complex subunit beta-1 (AP2B1), which play a role in clathrin-dependent protein sorting

+

   

DDB0304807

tgrO4, immunoglobulin E-set domain-containing protein, tgr (tiger) = Transmembrane, IPT, IG, E-set, Repeat protein

+

   

DDB0233801

copG, adaptin N-terminal domain-containing protein

+

   

coatomer protein complex gamma subunit

gamma-COP

DDB0306480

Single C-terminal TM

+

   

DDB0238597

Dnajc13, DnaJ (Hsp40) homolog, subfamily C, member 13, very similar to the mammalian DnaJ homolog subfamily C member 13, required in D. melanogaster (Rme-8) for receptor-mediated endocytosis 8

+

   

DDB0185049

myoI, class VII unconventional myosin

+

   

myosin VII, similar to the conserved MYO7A; unconventional myosin required in Dictyostelium for phagocytosis and substrate adhesion, interacts with talA

DDB0234198

vps13A, vacuolar protein sorting-associated protein 13 family protein, putative ortholog of S. cerevisiae VPS13, involved in vacuolar protein sorting and protein-Golgi retention

+

   

Related to signal transduction

DDB0191258

pppA, protein phosphatase 2A subunit A

 

+

  

DDB0235201

guanylate-binding protein

+

   

GTP-binding protein, 92 kDa

DDB0233622

zizB, DOCK family protein, putative guanine nucleotide exchange factor (GEF)

+

   

DDB0233623

zizA, DOCK family protein, putative guanine nucleotide exchange factor (GEF)

+

   

Cytoskeleton

DDB0201554

abpC, filamin

 

+

+

 

DDB0233781

Centrosomal, 80 kDa

 

+

  

DDB0191169

tubB, tubulin

 

+

  

DDB0191115

corA

+

+

+

 

DDB0185096

cytoplasmic dynein heavy chain,

+

   

dynein beta chain, flagellar outer arm

DDB0185049

myoI class VII unconventional myosin

+

   

myosin VII, similar to the conserved MYO7A; unconventional myosin required in Dictyostelium for phagocytosis and substrate adhesion, interacts with talA

DDB0191103

cortexillin I

  

+

Â